graph topology
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Understanding the Failure Modes of Transformers through the Lens of Graph Neural Networks
Transformers and more specifically decoder-only transformers dominate modern LLM architectures. While they have shown to work exceptionally well, they are not without issues, resulting in surprising failure modes and predictably asymmetric performance degradation. This article is a study of many of these observed failure modes of transformers through the lens of graph neural network (GNN) theory. We first make the case that much of deep learning, including transformers, is about learnable information mixing and propagation. This makes the study of model failure modes a study of bottlenecks in information propagation. This naturally leads to GNN theory, where there is already a rich literature on information propagation bottlenecks and theoretical failure modes of models. We then make the case that many issues faced by GNNs are also experienced by transformers. In addition, we analyze how the causal nature of decoder-only transformers create interesting geometric properties in information propagation, resulting in predictable and potentially devastating failure modes. Finally, we observe that existing solutions in transformer research tend to be ad-hoc and driven by intuition rather than grounded theoretical motivation. As such, we unify many such solutions under a more theoretical perspective, providing insight into why they work, what problem they are actually solving, and how they can be further improved to target specific failure modes of transformers. Overall, this article is an attempt to bridge the gap between observed failure modes in transformers and a general lack of theoretical understanding of them in this space. Much of modern deep learning can be understood as the study of learnable information mixing and propagation, a perspective that unifies seemingly disparate architectures under a common lens.
Disentangled Control of Multi-Agent Systems
Lin, Ruoyu, Notomista, Gennaro, Egerstedt, Magnus
This paper develops a general framework for multi-agent control synthesis, which applies to a wide range of problems with convergence guarantees, regardless of the complexity of the underlying graph topology and the explicit time dependence of the objective function. The proposed framework systematically addresses a particularly challenging problem in multi-agent systems, i.e., decentralization of entangled dynamics among different agents, and it naturally supports multi-objective robotics and real-time implementations. To demonstrate its generality and effectiveness, the framework is implemented across three experiments, namely time-varying leader-follower formation control, decentralized coverage control for time-varying density functions without any approximations, which is a long-standing open problem, and safe formation navigation in dense environments.
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Joint learning of a network of linear dynamical systems via total variation penalization
Donnat, Claire, Klopp, Olga, Tyagi, Hemant
We consider the problem of joint estimation of the parameters of $m$ linear dynamical systems, given access to single realizations of their respective trajectories, each of length $T$. The linear systems are assumed to reside on the nodes of an undirected and connected graph $G = ([m], \mathcal{E})$, and the system matrices are assumed to either vary smoothly or exhibit small number of ``jumps'' across the edges. We consider a total variation penalized least-squares estimator and derive non-asymptotic bounds on the mean squared error (MSE) which hold with high probability. In particular, the bounds imply for certain choices of well connected $G$ that the MSE goes to zero as $m$ increases, even when $T$ is constant. The theoretical results are supported by extensive experiments on synthetic and real data.
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Rethinking Graph Super-resolution: Dual Frameworks for Topological Fidelity
Graph super-resolution, the task of inferring high-resolution (HR) graphs from low-resolution (LR) counterparts, is an underexplored yet crucial research direction that circumvents the need for costly data acquisition. This makes it especially desirable for resource-constrained fields such as the medical domain. While recent GNN-based approaches show promise, they suffer from two key limitations: (1) matrix-based node super-resolution that disregards graph structure and lacks permutation invariance; and (2) reliance on node representations to infer edge weights, which limits scalability and expressivity. In this work, we propose two GNN-agnostic frameworks to address these issues. First, Bi-SR introduces a bipartite graph connecting LR and HR nodes to enable structure-aware node super-resolution that preserves topology and permutation invariance. Second, DEFEND learns edge representations by mapping HR edges to nodes of a dual graph, allowing edge inference via standard node-based GNNs. We evaluate both frameworks on a real-world brain connectome dataset, where they achieve state-of-the-art performance across seven topological measures. To support generalization, we introduce twelve new simulated datasets that capture diverse topologies and LR-HR relationships. These enable comprehensive benchmarking of graph super-resolution methods.
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